Journal Articles


2024


45 Z Vicars, J Choi, S Marks, R Remsing and AJ Patel. "Interfacial Ice Density Fluctuations Inform Surface Ice-philicity", The Journal of Physical Chemistry B (2024).

Paper Preprint

@article{vicars_interfacial_2024,
    title = {Interfacial {Ice} {Density} {Fluctuations} {Inform} {Surface} {Ice}-philicity},
    url = {https://pubs.acs.org/doi/full/10.1021/acs.jpcb.4c03783},
    doi = {10.1021/acs.jpcb.4c03783},
    journal = {The Journal of Physical Chemistry B},
    author = {Vicars, Zachariah and Choi, Jeongmoon and Marks, Sean and Remsing, Richard and Patel, Amish},
    month = aug,
    year = {2024},
    keywords = {ice, ice-philicity, molecular simulations, anti-freeze proteins, enhanced sampling},
}

44 AU Thosar, Y Cai, SM Marks, Z Vicars, J Choi, A Pallath, and AJ Patel. "On the Engulfment of Antifreeze Proteins by Ice", Proceedings of the National Academy of Sciences (2024).

Paper Preprint

@article{thosar_engulfment_2024,
    title = {On the engulfment of antifreeze proteins by ice},
    volume = {121},
    issn = {0027-8424, 1091-6490},
    url = {https://pnas.org/doi/10.1073/pnas.2320205121},
    doi = {10.1073/pnas.2320205121},
    number = {24},
    urldate = {2024-06-08},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Thosar, Aniket U. and Cai, Yusheng and Marks, Sean M. and Vicars, Zachariah and Choi, Jeongmoon and Pallath, Akash and Patel, Amish J.},
    month = jun,
    year = {2024},
    pages = {e2320205121},
}

2023


43 V Sudarshan, WD Seider, AJ Patel, UG Oktem and JE Arbogast. "Multivariate alarm systems to recognize rare unpostulated abnormal events", AIChE Journal (2023).

Paper

@article{sudarshan_multivariate_2023,
    title = {Multivariate alarm systems to recognize rare unpostulated abnormal events},
    issn = {0001-1541, 1547-5905},
    url = {https://aiche.onlinelibrary.wiley.com/doi/10.1002/aic.18284},
    doi = {10.1002/aic.18284},
    journal = {AIChE Journal},
    author = {Sudarshan, Vikram and Seider, Warren D. and Patel, Amish J. and Oktem, Ulku G. and Arbogast, Jeffrey E.},
    month = nov,
    year = {2023},
    pages = {e18284},
}

42 AU Thosar, Y Shalom, I Braslavsky, R Drori and AJ Patel. "The Accumulation of Antifreeze Proteins on Ice is Determined by Adsorption", Journal of the American Chemical Society (2023).

Paper Preprint

@article{thosar_accumulation_2023,
    title = {The {Accumulation} of {Antifreeze} {Proteins} on {Ice} is {Determined} by {Adsorption}},
    journal = {Journal of the American Chemical Society},
    url = {https://pubs.acs.org/doi/10.1021/jacs.3c02705},
    doi = {10.1021/jacs.3c02705},
    urldate = {2023-08-01},
    author = {Thosar, Aniket U. and Shalom, Yitzhar and Braslavsky, Ido and Drori, Ran and Patel, Amish J.},
    month = aug,
    year = {2023},
    keywords = {Anti-freeze proteins, Binding, Diffusion, Thermal Hysteresis},
}

41 SM Marks, Z Vicars, AU Thosar and AJ Patel. "Characterizing Surface Ice-philicity Using Molecular Simulations and Enhanced Sampling", The Journal of Physical Chemistry B (2023).

Paper Preprint

@article{marks_characterizing_2023,
    title = {Characterizing {Surface} {Ice}-philicity {Using} {Molecular} {Simulations} and {Enhanced} {Sampling}},
    journal = {The Journal of Physical Chemistry B},
    url = {https://pubs.acs.org/doi/10.1021/acs.jpcb.3c01627},
    doi = {10.1021/acs.jpcb.3c01627},
    urldate = {2023-06-28},
    author = {Marks, Sean and Vicars, Zachariah and Thosar, Aniket and Patel, Amish},
    month = june,
    year = {2023},
    keywords = {ice nucleation, interfacial thermodynamics, free energies, ice growth, crystallization},
}

2022


40 NB Rego, AL Ferguson and AJ Patel. "Learning the relationship between nanoscale chemical patterning and hydrophobicity", Proceedings of the National Academy of Sciences, 119 (48) e2200018119 (2022).

Paper

@article{
    doi:10.1073/pnas.2200018119,
    author = {Nicholas B. Rego  and Andrew L. Ferguson  and Amish J. Patel },
    title = {Learning the relationship between nanoscale chemical patterning and hydrophobicity},
    journal = {Proceedings of the National Academy of Sciences},
    volume = {119},
    number = {48},
    pages = {e2200018119},
    year = {2022},
    doi = {10.1073/pnas.2200018119},
    URL = {https://www.pnas.org/doi/abs/10.1073/pnas.2200018119},
    eprint = {https://www.pnas.org/doi/pdf/10.1073/pnas.2200018119}
}

39 NB Rego and AJ Patel. "Understanding Hydrophobic Effects: Insights from Water Density Fluctuations", Annual Review of Condensed Matter Physics, 13 (1), 303–324 (2022).

Paper arXiv preprint

@article{rego_understanding_2022,
    title = {Understanding {Hydrophobic} {Effects}: {Insights} from {Water} {Density} {Fluctuations}},
    volume = {13},
    issn = {1947-5454, 1947-5462},
    shorttitle = {Understanding {Hydrophobic} {Effects}},
    url = {https://www.annualreviews.org/doi/10.1146/annurev-conmatphys-040220-045516},
    doi = {10.1146/annurev-conmatphys-040220-045516},
    number = {1},
    urldate = {2022-06-21},
    journal = {Annual Review of Condensed Matter Physics},
    author = {Rego, Nicholas B. and Patel, Amish J.},
    month = mar,
    year = {2022},
    pages = {303--324},
}

38 AU Thosar and AJ Patel. "Hydration determines anion accumulation", Nature Chemistry, 14 (1), 8–10 (2022).

Paper

@article{thosar_hydration_2022,
	title = {Hydration determines anion accumulation},
	volume = {14},
	issn = {1755-4330, 1755-4349},
	url = {https://www.nature.com/articles/s41557-021-00864-2},
	doi = {10.1038/s41557-021-00864-2},
	number = {1},
	urldate = {2022-06-21},
	journal = {Nature Chemistry},
	author = {Thosar, Aniket U. and Patel, Amish J.},
	month = jan,
	year = {2022},
	pages = {8--10},
}

2021


37 V Sudarshan, WD Seider, AJ Patel and JE Arbogast. "Understanding Rare Safety and Reliability Events using Forward Flux Sampling", Computers and Chemical Engineering, 153, 107387 (2021).

Paper

@article{sudarshan_understanding_2021,
    title = {Understanding rare safety and reliability events using forward-flux sampling},
    volume = {153},
    issn = {00981354},
    url = {https://linkinghub.elsevier.com/retrieve/pii/S0098135421001654},
    doi = {10.1016/j.compchemeng.2021.107387},
    urldate = {2022-06-21},
    journal = {Computers \& Chemical Engineering},
    author = {Sudarshan, Vikram and Seider, Warren D. and Patel, Amish J. and Arbogast, Jeffery E.},
    month = oct,
    year = {2021},
    pages = {107387},
}

36 D Dhabal, Z Jiang, A Pallath and AJ Patel. "Characterizing the Interplay between Polymer Solvation and Conformation", The Journal of Physical Chemistry B, 125 (20), 5434–5442 (2021).

Paper arXiv preprint

@article{dhabal_characterizing_2021,
    title = {Characterizing the {Interplay} between {Polymer} {Solvation} and {Conformation}},
    volume = {125},
    issn = {1520-6106, 1520-5207},
    url = {https://pubs.acs.org/doi/10.1021/acs.jpcb.1c02191},
    doi = {10.1021/acs.jpcb.1c02191},
    number = {20},
    urldate = {2022-06-21},
    journal = {The Journal of Physical Chemistry B},
    author = {Dhabal, Debdas and Jiang, Zhitong and Pallath, Akash and Patel, Amish J.},
    month = may,
    year = {2021},
    pages = {5434--5442},
}

35 UR Gabinet, C Lee, R Poling-Skutvik, D Keane, NK Kim, R Dong, Z Vicars, Y Cai, AU Thosar, A Grun, SM Thompson, AJ Patel, CR Kagan, RJ Composto, and CO Osuji. "Nanocomposites of 2D-MoS2 Exfoliated in Thermotropic Liquid Crystals", ACS Materials Letters, 3(6), 704–712 (2021).


Paper

@article{gabinet_nanocomposites_2021,
    title = {Nanocomposites of 2d-mos $_{\textrm{2}}$ exfoliated in thermotropic liquid crystals},
    volume = {3},
    issn = {2639-4979, 2639-4979},
    url = {https://pubs.acs.org/doi/10.1021/acsmaterialslett.1c00222},
    doi = {10.1021/acsmaterialslett.1c00222},
    number = {6},
    urldate = {2022-06-21},
    journal = {ACS Materials Letters},
    author = {Gabinet, Uri R. and Lee, Changyeon and Poling-Skutvik, Ryan and Keane, Daniel and Kim, Na Kyung and Dong, Ruiqi and Vicars, Zachariah and Cai, Yusheng and Thosar, Aniket U. and Grun, Alexander and Thompson, Sarah M. and Patel, Amish J. and Kagan, Cherie R. and Composto, Russell J. and Osuji, Chinedum O.},
    month = jun,
    year = {2021},
    pages = {704--712},
}

34 NB Rego, E Xi, and AJ Patel. "Identifying Hydrophobic Protein Patches to Inform Protein Interaction Interfaces", Proceedings of the National Academy of Sciences, 118 (6) e2018234118 (2021).


Paper

@article{rego_identifying_2021,
    title = {Identifying hydrophobic protein patches to inform protein interaction interfaces},
    volume = {118},
    issn = {0027-8424, 1091-6490},
    url = {https://pnas.org/doi/full/10.1073/pnas.2018234118},
    doi = {10.1073/pnas.2018234118},
    number = {6},
    urldate = {2022-06-21},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Rego, Nicholas B. and Xi, Erte and Patel, Amish J.},
    month = feb,
    year = {2021},
    pages = {e2018234118},
}

2020


33 A Jayaraman and AJ Patel. "Molecular Design and Engineering of Biomimetic, Bioinspired and Biologically Derived Materials", Molecular Systems Design & Engineering, 5, 599-601 (2020). Editorial


Paper

@article{jayaraman_molecular_2020,
    title = {Molecular design and engineering of biomimetic, bioinspired and biologically derived materials},
    volume = {5},
    issn = {2058-9689},
    url = {http://xlink.rsc.org/?DOI=D0ME90011G},
    doi = {10.1039/D0ME90011G},
    number = {3},
    urldate = {2022-06-21},
    journal = {Molecular Systems Design \& Engineering},
    author = {Jayaraman, Arthi and Patel, Amish J.},
    year = {2020},
    pages = {599--601},
}

2019


32 H Jiang and AJ Patel. "Recent Advances in Estimating Contact Angles using Molecular Simulations and Enhanced Sampling Methods", Current Opinion in Chemical Engineering, 23, 130-137 (2019).


Paper

@article{jiang_recent_2019,
    title = {Recent advances in estimating contact angles using molecular simulations and enhanced sampling methods},
    volume = {23},
    issn = {22113398},
    url = {https://linkinghub.elsevier.com/retrieve/pii/S2211339819300115},
    doi = {10.1016/j.coche.2019.03.012},
    urldate = {2022-06-21},
    journal = {Current Opinion in Chemical Engineering},
    author = {Jiang, Hao and Patel, Amish J.},
    month = mar,
    year = {2019},
    pages = {130--137},
}

31 Z Jiang, R Remsing, N Rego, and AJ Patel. "Characterizing Solvent Density Fluctuations in Dynamical Observation Volumes", Journal of Physical Chemistry B, 123, 7, 1650-1661 (2019).


Paper arXiv Preprint

@article{jiang_characterizing_2019,
    title = {Characterizing solvent density fluctuations in dynamical observation volumes},
    volume = {123},
    issn = {1520-6106, 1520-5207},
    url = {https://pubs.acs.org/doi/10.1021/acs.jpcb.8b11423},
    doi = {10.1021/acs.jpcb.8b11423},
    language = {en},
    number = {7},
    urldate = {2022-06-21},
    journal = {The Journal of Physical Chemistry B},
    author = {Jiang, Zhitong and Remsing, Richard C. and Rego, Nicholas B. and Patel, Amish J.},
    month = feb,
    year = {2019},
    pages = {1650--1661},
}

30 H Jiang, S Fialoke, Z Vicars, and AJ Patel. "Characterizing Surface Wetting and Interfacial Properties using Enhanced Sampling (SWIPES)", Soft Matter, 15, 860-869 (2019).


Paper Correction arXiv Preprint

@article{jiang2019swipes,
  title={Characterizing surface wetting and interfacial properties using enhanced sampling (SWIPES)},
  author={Jiang, Hao and Fialoke, Suruchi and Vicars, Zachariah and Patel, Amish J},
  journal={Soft matter},
  volume={15},
  number={5},
  pages={860--869},
  year={2019},
  publisher={Royal Society of Chemistry}
}
@article{jiang2021swipescorrection,
  author="Jiang, Hao and Fialoke, Suruchi and Vicars, Zachariah and Patel, Amish J.",
  title="Correction: Characterizing surface wetting and interfacial properties using enhanced sampling (SWIPES)",
  journal="Soft Matter",
  year="2021",
  volume="17",
  issue="14",
  pages="3976-3977",
  publisher="The Royal Society of Chemistry",
  doi="10.1039/D1SM90055B"
}

29 N Rego, E Xi, and AJ Patel. "Protein Hydration Waters are Susceptible to Unfavorable Perturbations", Journal of the American Chemical Society, 141, 2080-2086 (2019).


Paper arXiv Preprint

@article{rego_protein_2019,
    title = {Protein hydration waters are susceptible to unfavorable perturbations},
    volume = {141},
    issn = {0002-7863, 1520-5126},
    url = {https://pubs.acs.org/doi/10.1021/jacs.8b11448},
    doi = {10.1021/jacs.8b11448},
    language = {en},
    number = {5},
    urldate = {2022-06-21},
    journal = {Journal of the American Chemical Society},
    author = {Rego, Nicholas B. and Xi, Erte and Patel, Amish J.},
    month = feb,
    year = {2019},
    pages = {2080--2086},
}

2018


28 S Marks and AJ Patel. "Antifreeze Protein Hydration Waters: Unstructured Unless Bound to Ice", Proceedings of the National Academy of Sciences, 115, 8244-8246 (2018).


Paper

@article{marks_antifreeze_2018,
    title = {Antifreeze protein hydration waters: {Unstructured} unless bound to ice},
    volume = {115},
    issn = {0027-8424, 1091-6490},
    shorttitle = {Antifreeze protein hydration waters},
    url = {https://pnas.org/doi/full/10.1073/pnas.1810812115},
    doi = {10.1073/pnas.1810812115},
    language = {en},
    number = {33},
    urldate = {2022-06-21},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Marks, Sean M. and Patel, Amish J.},
    month = aug,
    year = {2018},
    pages = {8244--8246},
}    

27 E Xi, S Marks, S Fialoke, and AJ Patel. Sparse Sampling of Water Density Fluctuations Near Liquid-Vapor Coexistence, Molecular Simulation, 44:13-14, 1124-1135 (2018).


Paper

@article{xi_sparse_2018,
    title = {Sparse sampling of water density fluctuations near liquid-vapor coexistence},
    volume = {44},
    issn = {0892-7022},
    url = {https://doi.org/10.1080/08927022.2018.1457218},
    doi = {10.1080/08927022.2018.1457218},
    number = {13-14},
    urldate = {2022-06-21},
    journal = {Molecular Simulation},
    author = {Xi, Erte and Marks, Sean M. and Fialoke, Suruchi and Patel, Amish J.},
    month = sep,
    year = {2018},
    keywords = {Free energy method, umbrella sampling, thermodynamic integration, hydrophobic confinement},
    pages = {1124--1135},
}    

26 R Remsing, E Xi, and AJ Patel. "Protein Hydration Thermodynamics: The Influence of Flexibility and Salt on Hydrophobin II Hydration", Journal of Physical Chemistry B, 122, 3635-3646 (2018).


Paper

@article{remsing_protein_2018,
    title = {Protein hydration thermodynamics: the influence of flexibility and salt on hydrophobin ii hydration},
    volume = {122},
    issn = {1520-6106, 1520-5207},
    shorttitle = {Protein hydration thermodynamics},
    url = {https://pubs.acs.org/doi/10.1021/acs.jpcb.7b12060},
    doi = {10.1021/acs.jpcb.7b12060},
    language = {en},
    number = {13},
    urldate = {2022-06-21},
    journal = {The Journal of Physical Chemistry B},
    author = {Remsing, Richard C. and Xi, Erte and Patel, Amish J.},
    month = apr,
    year = {2018},
    pages = {3635--3646},
}

25 IH Moskowitz, WD Seider, AJ Patel, JE Arbogast, and UG Oktem, "Understanding rare safety and reliability events using transition path sampling", Computers & Chemical Engineering, 108, 74-88 (2018).


Paper

@article{moskowitz_understanding_2018,
    title = {Understanding rare safety and reliability events using transition path sampling},
    volume = {108},
    issn = {0098-1354},
    url = {https://www.sciencedirect.com/science/article/pii/S0098135417302624},
    doi = {10.1016/j.compchemeng.2017.06.016},
    urldate = {2022-06-21},
    journal = {Computers \& Chemical Engineering},
    author = {Moskowitz, Ian H. and Seider, Warren D. and Patel, Amish J. and Arbogast, Jeffrey E. and Oktem, Ulku G.},
    month = jan,
    year = {2018},
    keywords = {Risk analysis, Abnormal events, Transition path sampling},
    pages = {74--88},
}

2017


24 E Xi, V Venkateshwaran, L Li, N Rego, AJ Patel, and S Garde, "Hydrophobicity of proteins and nanostructured solutes is governed by topographical and chemical context", Proceedings of the National Academy of Sciences, 114, 13345-13350 (2017).


Paper

@article{xi_hydrophobicity_2017,
    title = {Hydrophobicity of proteins and nanostructured solutes is governed by topographical and chemical context},
    volume = {114},
    issn = {0027-8424, 1091-6490},
    url = {https://pnas.org/doi/full/10.1073/pnas.1700092114},
    doi = {10.1073/pnas.1700092114},
    number = {51},
    urldate = {2022-06-21},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Xi, Erte and Venkateshwaran, Vasudevan and Li, Lijuan and Rego, Nicholas and Patel, Amish J. and Garde, Shekhar},
    month = dec,
    year = {2017},
    pages = {13345--13350},
}

2016


23 S Prakash, E Xi, and AJ Patel, "Spontaneous Recovery of Superhydrophobicity on Nanotextured Surfaces", Proceedings of the National Academy of Sciences, 113, 5508-5513 (2016).


Paper

@article{prakash_spontaneous_2016,
    title = {Spontaneous recovery of superhydrophobicity on nanotextured surfaces},
    volume = {113},
    issn = {0027-8424, 1091-6490},
    url = {https://pnas.org/doi/full/10.1073/pnas.1521753113},
    doi = {10.1073/pnas.1521753113},
    number = {20},
    urldate = {2022-06-21},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Prakash, Suruchi and Xi, Erte and Patel, Amish J.},
    month = may,
    year = {2016},
    pages = {5508--5513},
}

22 E Xi and AJ Patel, "The Hydrophobic Effect and Fluctuations: The Long and the Short of it", Proceedings of the National Academy of Sciences, 113, 4549-4551 (2016).


Paper

@article{xi_hydrophobic_2016,
    title = {The hydrophobic effect, and fluctuations: {The} long and the short of it},
    volume = {113},
    issn = {0027-8424, 1091-6490},
    shorttitle = {The hydrophobic effect, and fluctuations},
    url = {https://pnas.org/doi/full/10.1073/pnas.1603014113},
    doi = {10.1073/pnas.1603014113},
    number = {17},
    urldate = {2022-06-21},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Xi, Erte and Patel, Amish J.},
    month = apr,
    year = {2016},
    pages = {4549--4551},
}

21 E Xi, RC Remsing, and AJ Patel, "Sparse Sampling of Water Density Fluctuations in Interfacial Environments", Journal of Chemical Theory and Computation, 12, 706-713 (2016).


Paper

@article{xi_sparse_2016,
    title = {Sparse sampling of water density fluctuations in interfacial environments},
    volume = {12},
    issn = {1549-9618, 1549-9626},
    url = {https://pubs.acs.org/doi/10.1021/acs.jctc.5b01037},
    doi = {10.1021/acs.jctc.5b01037},
    language = {en},
    number = {2},
    urldate = {2022-06-21},
    journal = {Journal of Chemical Theory and Computation},
    author = {Xi, Erte and Remsing, Richard C. and Patel, Amish J.},
    month = feb,
    year = {2016},
    pages = {706--713},
}

2015


20 RC Remsing, E Xi, S Vembanur, S Sharma, PG Debenedetti, S Garde, and AJ Patel, "Pathways to dewetting in hydrophobic confinement", Proceedings of the National Academy of Sciences, 112, 8181-8186 (2015).


Paper Media Coverage

@article{remsing_pathways_2015,
    title = {Pathways to dewetting in hydrophobic confinement},
    volume = {112},
    issn = {0027-8424, 1091-6490},
    url = {https://pnas.org/doi/full/10.1073/pnas.1503302112},
    doi = {10.1073/pnas.1503302112},
    number = {27},
    urldate = {2022-06-21},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Remsing, Richard C. and Xi, Erte and Vembanur, Srivathsan and Sharma, Sumit and Debenedetti, Pablo G. and Garde, Shekhar and Patel, Amish J.},
    month = jul,
    year = {2015},
    pages = {8181--8186},
}

19 RC Remsing and AJ Patel, "Water Density Fluctuations Relevant to Hydrophobic Hydration are Unaltered by Attractions", Journal of Chemical Physics, 142, 024502 (2015).


Paper

@article{remsing_water_2015,
    title = {Water density fluctuations relevant to hydrophobic hydration are unaltered by attractions},
    volume = {142},
    issn = {0021-9606, 1089-7690},
    url = {http://aip.scitation.org/doi/10.1063/1.4905009},
    doi = {10.1063/1.4905009},
    language = {en},
    number = {2},
    urldate = {2022-06-21},
    journal = {The Journal of Chemical Physics},
    author = {Remsing, Richard C. and Patel, Amish J.},
    month = jan,
    year = {2015},
    pages = {024502},
}

2014


18 AJ Patel and S Garde, "An Efficient Method to Characterize the Context-Dependent Hydrophobicity of Proteins", The Journal of Physical Chemistry B, 118, 1564 (2014).


Paper

@article{patel_efficient_2014,
    title = {Efficient method to characterize the context-dependent hydrophobicity of proteins},
    volume = {118},
    issn = {1520-6106, 1520-5207},
    url = {https://pubs.acs.org/doi/10.1021/jp4081977},
    doi = {10.1021/jp4081977},
    language = {en},
    number = {6},
    urldate = {2022-06-21},
    journal = {The Journal of Physical Chemistry B},
    author = {Patel, Amish J. and Garde, Shekhar},
    month = feb,
    year = {2014},
    pages = {1564--1573},
}

2013


17 S Vembanur, AJ Patel, S Sarupria, and S Garde, "On the Thermodynamics and Kinetics of Hydrophobic Interactions at Interfaces", The Journal of Physical Chemistry B, 117, 10261 (2013).


Paper

@article{vembanur_thermodynamics_2013,
    title = {On the thermodynamics and kinetics of hydrophobic interactions at interfaces},
    volume = {117},
    issn = {1520-6106, 1520-5207},
    url = {https://pubs.acs.org/doi/10.1021/jp4050513},
    doi = {10.1021/jp4050513},
    language = {en},
    number = {35},
    urldate = {2022-06-21},
    journal = {The Journal of Physical Chemistry B},
    author = {Vembanur, Srivathsan and Patel, Amish J. and Sarupria, Sapna and Garde, Shekhar},
    month = sep,
    year = {2013},
    pages = {10261--10270},
}

2012


16 AJ Patel, P Varilly, SN Jamadagni, M Hagan, D Chandler, and S Garde, "Sitting at the Edge: How Biomolecules Use Hydrophobicity to Tune their Interactions and Function", The Journal of Physical Chemistry B 116, 2498 (2012).


Paper

@article{patel_sitting_2012,
    title = {Sitting at the edge: how biomolecules use hydrophobicity to tune their interactions and function},
    volume = {116},
    issn = {1520-6106, 1520-5207},
    shorttitle = {Sitting at the edge},
    url = {https://pubs.acs.org/doi/10.1021/jp2107523},
    doi = {10.1021/jp2107523},
    language = {en},
    number = {8},
    urldate = {2022-06-21},
    journal = {The Journal of Physical Chemistry B},
    author = {Patel, Amish J. and Varilly, Patrick and Jamadagni, Sumanth N. and Hagan, Michael F. and Chandler, David and Garde, Shekhar},
    month = mar,
    year = {2012},
    pages = {2498--2503},
}

2011


15 B Rotenberg, AJ Patel, and D Chandler, "Molecular Explanation for Why Talc Surfaces can be Both Hydrophilic and Hydrophobic", Journal of the American Chemical Society, 133, 20521 (2011).


Paper

@article{rotenberg_molecular_2011,
    title = {Molecular explanation for why talc surfaces can be both hydrophilic and hydrophobic},
    volume = {133},
    issn = {0002-7863, 1520-5126},
    url = {https://pubs.acs.org/doi/10.1021/ja208687a},
    doi = {10.1021/ja208687a},
    language = {en},
    number = {50},
    urldate = {2022-06-21},
    journal = {Journal of the American Chemical Society},
    author = {Rotenberg, Benjamin and Patel, Amish J. and Chandler, David},
    month = dec,
    year = {2011},
    pages = {20521--20527},
}

14 AJ Patel, P Varilly, SN Jamadagni, H Acharya, S Garde, and D Chandler, "Extended Surfaces Modulate Hydrophobic Interactions of Neighboring Solutes", Proceedings of the National Academy of Sciences, 108, 17678 (2011).


Paper

@article{patel_extended_2011,
    title = {Extended surfaces modulate hydrophobic interactions of neighboring solutes},
    volume = {108},
    issn = {0027-8424, 1091-6490},
    url = {https://pnas.org/doi/full/10.1073/pnas.1110703108},
    doi = {10.1073/pnas.1110703108},
    number = {43},
    urldate = {2022-06-21},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Patel, Amish J. and Varilly, Patrick and Jamadagni, Sumanth N. and Acharya, Hari and Garde, Shekhar and Chandler, David},
    month = oct,
    year = {2011},
    pages = {17678--17683},
}

13 S Garde and AJ Patel, "Unraveling the Hydrophobic Effect, One Molecule at a Time", Proceedings of the National Academy of Sciences, 108, 16491 (2011).


Paper

@article{garde_unraveling_2011,
    title = {Unraveling the hydrophobic effect, one molecule at a time},
    volume = {108},
    issn = {0027-8424, 1091-6490},
    url = {https://pnas.org/doi/full/10.1073/pnas.1113256108},
    doi = {10.1073/pnas.1113256108},
    language = {en},
    number = {40},
    urldate = {2022-06-21},
    journal = {Proceedings of the National Academy of Sciences},
    author = {Garde, Shekhar and Patel, Amish J.},
    month = oct,
    year = {2011},
    pages = {16491--16492},
}

12 AJ Patel, P Varilly, D Chandler, and S Garde, "Quantifying Density Fluctuations in Volumes of All Shapes and Sizes using Indirect Umbrella Sampling", Journal of Statistical Physics, 145, 265 (2011).


Paper

@article{patel_quantifying_2011,
    title = {Quantifying density fluctuations in volumes of all shapes and sizes using indirect umbrella sampling},
    volume = {145},
    issn = {1572-9613},
    url = {https://doi.org/10.1007/s10955-011-0269-9},
    doi = {10.1007/s10955-011-0269-9},
    number = {2},
    urldate = {2022-06-21},
    journal = {Journal of Statistical Physics},
    author = {Patel, Amish J. and Varilly, Patrick and Chandler, David and Garde, Shekhar},
    month = oct,
    year = {2011},
    pages = {265--275},
}

11 P Varilly, AJ Patel, and D Chandler, "An Improved Coarse-grained Model of Solvation and the Hydrophobic Effect", Journal of Chemical Physics, 134, 074109 (2011). Selected by the journal as a research highlight article for February 2011.


Paper

@article{varilly_improved_2011,
    title = {An improved coarse-grained model of solvation and the hydrophobic effect},
    volume = {134},
    issn = {0021-9606, 1089-7690},
    url = {http://aip.scitation.org/doi/10.1063/1.3532939},
    doi = {10.1063/1.3532939},
    language = {en},
    number = {7},
    urldate = {2022-06-21},
    journal = {The Journal of Chemical Physics},
    author = {Varilly, Patrick and Patel, Amish J. and Chandler, David},
    month = feb,
    year = {2011},
    pages = {074109},
}

10 AJ Patel, TJ Rappl, and NP Balsara, "Similarities of the Signatures of the Initial Stages of Phase Separation in Metastable and Unstable Polymer Blends", Physical Review Letters, 106, 035702 (2011).


Paper


                                    

2010


9 AJ Patel, S Mochrie, S Narayanan, A Sandy, H Watanabe, and NP Balsara, "Dynamic Signatures of Microphase Separation in a Block Copolymer Melt Determined by X-ray Photon Correlation Spectroscopy and Rheology", Macromolecules 43, 1515 (2010).


Paper


                                    

8 AJ Patel, P Varilly, and D Chandler, "Fluctuations of Water Near Extended Hydrophobic and Hydrophilic Surfaces", The Journal of Physical Chemistry B 114, 1632 (2010).


Paper

@article{patel_fluctuations_2010,
    title = {Fluctuations of water near extended hydrophobic and hydrophilic surfaces},
    volume = {114},
    issn = {1520-6106, 1520-5207},
    url = {https://pubs.acs.org/doi/10.1021/jp909048f},
    doi = {10.1021/jp909048f},
    language = {en},
    number = {4},
    urldate = {2022-06-21},
    journal = {The Journal of Physical Chemistry B},
    author = {Patel, Amish J. and Varilly, Patrick and Chandler, David},
    month = feb,
    year = {2010},
    pages = {1632--1637},
}

2007


7 M Singh, O Odusanya, GM Wilmes, HB Eitouni, ED Gomez, AJ Patel, VL Chen, MJ Park, P Fragouli, H Iatrou, N Hadjichristidis, D Cookson, and NP Balsara, "Effect of Molecular Weight on the Mechanical and Electrical Properties of Block Copolymer Electrolytes", Macromolecules 40, 4578 (2007).


Paper


                                    

6 AJ Patel and NP Balsara, "Observing Nucleation Close to the Binodal by Perturbing Metastable Polymer Blends", Macromolecules 40, 1675 (2007).


Paper


                                    

2006


5 ML Ruegg, AJ Patel, S Narayanan, A Sandy, SGJ Mochrie, H Watanabe, and NP Balsara, "Condensed Exponential Correlation Functions in Multicomponent Polymer Blends Measured by X-ray Photon Correlation Spectroscopy", Macromolecules 39, 8822 (2006).


Paper


                                    

4 AJ Patel, S Narayanan, A Sandy, SGJ Mochrie, BA Garetz, H Watanabe, and NP Balsara, "Relationship between Structural and Stress Relaxation in a Block-Copolymer Melt", Physical Review Letters 96, 257801 (2006).


Paper


                                    

3 FM Abuzaina, BA Garetz, AJ Patel, MC Newstein, SP Gido, XC Hu, and NP Balsara, "Observation of Nematic Texture in a Diblock Copolymer Melt", Macromolecules 39, 3377 (2006).


Paper


                                    

2005


2 BA Garetz, MC Newstein, JD Wilbur, AJ Patel, DA Durkee, RA Segalman, JA Liddle, and NP Balsara, "Grain Structure in Block Copolymer Thin Films Studied by Guided Wave Depolarized Light Scattering", Macromolecules 38, 4282 (2005).


Paper


                                    

1 FM Abuzaina, AJ Patel, S Mochrie, S Narayanan, A Sandy, BA Garetz, and NP Balsara, "Structure and Phase Behavior of Block Copolymer Melts Near the Sphere-Cylinder Boundary", Macromolecules 38, 7090 (2005).


Paper